COV2HTML provides an easy and 'in home' web interface for biologists that allows coverage visualization of the NGS alignment needed for the analysis. It combines two essential processes: (i) MAP2COV, a tool that converts the huge NGS mapping or coverage files into light specific coverage files which contains genetic elements informations. (ii) COV2HTML, a visualization interface allowing a real-time analysis of data with selected criteria. Thus this interface offers a visualization of NGS mapping coverage data (DNA-seq, RNA-seq, ChIP-seq and TSS) performed in different prokaryotic organisms (bacteria, viruses...) or different experimental conditions (mutant versus wild type strains or different growth states…) facilitating studies.
Latest 5 files |
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Nombre | Tamaño | Fecha | Download count |
map2cov_4.4_SRC.zip | 86.9 KB | 2014-09-29 18:50 | 11 |
map2cov_4.4_WIN.zip | 4.4 MB | 2014-09-29 18:50 | 6 |
map2cov_4.4_MAC.zip | 8.3 MB | 2014-09-29 18:50 | 9 |
COV2HTML_SQL.gz | 1.9 MB | 2014-09-12 21:10 | 6 |
COV2HTML_PHP.zip | 33.7 MB | 2014-07-24 20:54 | 10 |
Todos los Ficheros |
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MAP2COV - Convert Mapping into Coverage files | |||
map2cov_4.4_SRC.zip | 86.9 KB | 2014-09-29 18:50 | 11 |
map2cov_4.4_WIN.zip | 4.4 MB | 2014-09-29 18:50 | 6 |
map2cov_4.4_MAC.zip | 8.3 MB | 2014-09-29 18:50 | 9 |
README.txt | 0.5 KB | 2014-02-19 21:50 | 3 |
COV2HTML - Test files, PHP folder and SQL file | |||
COV2HTML_SQL.gz | 1.9 MB | 2014-09-12 21:10 | 6 |
COV2HTML_PHP.zip | 33.7 MB | 2014-07-24 20:54 | 10 |
readme.txt | 0.6 KB | 2013-03-08 23:58 | 6 |
Case-study-1_RNA-seq.zip | 5.5 MB | 2012-07-19 18:59 | 5 |
Case-study-2_TSS-seq.zip | 1.6 MB | 2012-07-19 18:58 | 4 |
Case-study-3_Mix-analysis.zip | 2.4 MB | 2012-07-19 18:58 | 2 |
DNA-seq_Unpublished.zip | 2.2 MB | 2012-07-19 18:58 | 5 |
readme.txt | 0.4 KB | 2014-02-19 21:51 | 2 |
GUIDES - DNA-, RNA-, TSS-, ChIP-seq, MIX, Statistics and LOCAL Installation | |||
MAP2COV_guide.pdf | 242.8 KB | 2013-03-07 23:28 | 14 |
COV2HTML_DNA-guide.pdf | 355.5 KB | 2013-03-07 23:27 | 8 |
COV2HTML_RNA-guide.pdf | 362.0 KB | 2013-03-07 23:27 | 26 |
COV2HTML_TSS-guide.pdf | 361.2 KB | 2013-03-07 23:27 | 18 |
COV2HTML_CHIP-guide.pdf | 362.3 KB | 2013-03-07 23:27 | 26 |
COV2HTML_MIX-guide.pdf | 346.6 KB | 2013-03-07 23:27 | 22 |
COV2HTML_STAT_guide.pdf | 253.0 KB | 2013-03-07 23:27 | 22 |
COV2HTML_Local-Install.pdf | 80.1 KB | 2013-03-07 23:26 | 21 |
readme.txt | 0.1 KB | 2013-03-07 23:23 | 2 |